General

• Stack Overflow – Where Developers Learn, Share, & Build Careers
• ibiology – Talks of biology
• Timeline of Neuroscience
• History of Neuroscience

Molecular Biology

• Genes – basic info and primer design and sqRNA, finding plasmids, constructs, antibodies, buffers
  • NCBI Blast
  • Gene Card – Gene Searcher
  • New England Biolabs Primer Design
  • MGH Primer Design
  • New England Biolabs Site-Directed Mutagenesis Design
  • Origene – Cloning and Gene Editing
• Gene and Protein Expression
  • Human Protein Expression
  • Brain Immune Atlas
  • Allen Brain Atlas In Situ
• Protein Sequence and Structure
  • NCBI Conserved Protein Domain Search
  • SMART Sequence Analysis
  • Clustal Omega Sequence Alignment
  • NCBI Protein Blast
  • IUPred2A – Intrinsically Disorder Protein Search
  • D2P2 – Disorder Protein Motif Detection
  • PONDR – Disorder Protein Motif Detection
• Protein-Protein Interaction
  • BioGRID – Protein Interaction Search
  • STRING – Protein-Protein Interaction Search
  • inBIO Discover – Protein-Protein Interaction Search
• Protein Subcellular Localization
  • Compartments – Subcellular Localization Database
  • UniProtKB- Subcellular Localization Database
• Post-Translational Modifications
  • PhosphoSitePlus – Post-Translational Modification Search

Sequencing

• RNA Sequencing Database
  • Broad Inst. – Single Cell Sequencing Database
  • Allen Brain Inst. – Single Cell Sequencing Database
  • Genentech – Myeloid Landscape Database
  • Barres Lab – Brain RNA-Seq
  • Ye Zhang Lab – RNAseq Database
• Online Tools for Analysis of Sequencing and Omics Data
  • OmicShare – Heatmap Generator
  • DAVID – Bioinformatic Resource Database
  • R Crash Course – Bioinformatic Crashcourse Training
  • Metascape – Gene Annotation and Analysis Resource

Electrophysiology

• Resources of Tools and Hardware for Electrophysiology and Neuroscience Related Information
  • Blue Brain Tool – Online Resources
  • ICL – Neural Interface Probes
  • NeuroNexus – Recording Probes
  • Brain Support – EEG Electrodes
  • Cambridge – Silicon Probes
• Coding and Data Processing Resources
  • Kluster, Neuroscope and NDManager
  • Algo Expert – Coding Interview Practice
  • GitHub
  • MATLAB Neuroscience Code
  • Electronic Device Manual Repository
  • CRCNS – Collaborative for Computational Neuroscience
• Databases for Neuronal Electrophysiology and Morphology
  • NeuroElectro
  • Allen Brain Atlas Electrophysiology Database
  • NeuroMorph

Special Techniques

• CRISPR – ChopChop
• Stanford Optogenetic Resource
• CLARITRY Resources
• Video Protocols -JOVE
• MouseLight Neuron Browser
• AnyMaze Behavior Analysis Software

Virus Resources

• Add Gene Virus
• UNC Gene Core

Antibodies and Chemicals

• RRID Search
• CiteAB
• Selleck Chemicals
• Synaptic Systems – PV antibody
• Immunostar – VIP antibody
• Swant – Calbindin antibody
• Swant – Calrentin antibody
• Immunostar – CCK antibody